Linkage Disequilibrium Heatmap
Visualize r² between SNP pairs and watch LD decay with recombination over generations
Parameters
SNPs:
16
Population size:
200
Recombination rate:
0.01
Generations to simulate:
50
Simulate Population
Add Recombination Event
Mean r²:
—
Max r²:
—
LD blocks:
—
r²=0
0.25
0.5
0.75
r²=1
r² Heatmap
LD Decay by Distance